CDS

Accession Number TCMCG050C44781
gbkey CDS
Protein Id KAG6780001.1
Location join(18664356..18664652,18664720..18664825,18664939..18665147,18665567..18665620,18666601..18666751,18666835..18667226,18667832..18668050,18668697..18668802,18669030..18669052,18669930..18670041,18670141..18670323,18670764..18670843,18671159..18671281,18671477..18671563,18673240..18673340,18674358..18674415,18674687..18674756,18675268..18675370,18675770..18675850,18675940..18676021,18677162..18677233,18677360..18677391,18678572..18678629,18678903..18678968,18679990..18680072,18680162..18680345,18681151..18681297,18681387..18681488,18681587..18681739,18682239..18682355,18683253..18683357,18684997..18685137,18685274..18685363,18685450..18685506,18687111..18687194,18688935..18689033,18689149..18689289,18690047..18690117,18691000..18691069,18691324..18691416,18691634..18691714,18693286..18693498,18694200..18694292,18695144..18695266,18695582..18695659)
Organism Populus tomentosa
locus_tag POTOM_016408

Protein

Length 1729aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA613008, BioSample:SAMN14390005
db_source JAAWWB010000007.1
Definition hypothetical protein POTOM_016408 [Populus tomentosa]
Locus_tag POTOM_016408

EGGNOG-MAPPER Annotation

COG_category A
Description ATP-dependent RNA helicase
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko03012        [VIEW IN KEGG]
KEGG_ko ko:K18995        [VIEW IN KEGG]
EC 3.6.4.13        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway -
GOs GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003723        [VIEW IN EMBL-EBI]
GO:0003724        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0004004        [VIEW IN EMBL-EBI]
GO:0004386        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006396        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008026        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008186        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016282        [VIEW IN EMBL-EBI]
GO:0016462        [VIEW IN EMBL-EBI]
GO:0016787        [VIEW IN EMBL-EBI]
GO:0016817        [VIEW IN EMBL-EBI]
GO:0016818        [VIEW IN EMBL-EBI]
GO:0016887        [VIEW IN EMBL-EBI]
GO:0017111        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0042623        [VIEW IN EMBL-EBI]
GO:0043021        [VIEW IN EMBL-EBI]
GO:0043024        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0044877        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0070035        [VIEW IN EMBL-EBI]
GO:0070993        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0140098        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1990904        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGCTCCCAAGAAGAATCCACAGAGAAGCAGCAGCAACAACAAAGCATCCTCTTCGAAATCAAAATCATCTTCTAATTCCGGTCCAAGACTCCAGATTTCAGCCGAGAACGAGAACCGCCTACGCCGTCTCCTACTCAACTCCACAACCACTCCGCCTCTACAAACCACCGTTACTGATAACACTAACTCTCTCTCTAAAGCACAAAAAGCTAAAAAGCTTAAGAATATTTACGAGAAACTCTCCTGTGAAGGCTTCTCTAATGATCATATTGAACTCGCTCTTTCTTCTCTCAAGGATAATGCGACATTTGAGACCGCGCTTGATTGGTTATGCTTGAATTTGGCCGGAAATGAGCTTCCCTTGAAGTTCTCTGGCGGAACTTCTCTCAATTCTGATCGAGGTTCTGTTAGTGTGGTATCGACTGCCAGGGAAGATTGGGTTCCTTATGTGGATTCGTCTAGAAGGATTGAGGGTGAGGAGGAGGAGCAGCGAGTTTTGGTTAGAACCAAGGCGCGGTGGGATGAGGAGGATGGTGATGGTAATGTTCTTGATTTCCGCCAACCGTCGCAAGCGGATTGGATTAGGCAGTATGTAGAGCAACAGGAAGAGGAGGAATCTAAAACTTGGGAAGATGATTCAGTTGATGGAAGTTTCACCAACAAGGATCGACAACCAAGAACTTATGATGTTATTGCCAAAGAGTACCATGCAGTGCGTTTGGAAGCTACAAAGGCCAAGGAAAAAGGGGACAAGAAGAGCCAAGAACAGGCAGGCCATGTTATCCGCAAACTCAAGCAAGAAATATCTGCTCTAGGATTATCACTTGATCTCTTGGAACAAGATTTTGGTCATCAACATGTTTATGAGGACATGTTTTCTACTTCCACTCCTTGCGAGCACTTTGAGGCAATAACATCATTTGACGTGGAAGGTGATTCCACCATTGAATCAATAGTTGATGAAAATGATTTGGAAAGTTCAAGCTCCATTGGTTTTCCATTGAATCCTGTTCCCCCTAGTGTGCCCCTCGAGGGAGAAATTGTCTCGGACGAATCGGAAGATGTGGAGATTGGCGACTTCTTCATAGATGATGCATCACCTAATGATGCTTTATCTCCTGGAATATTGGAGATACAGAAGAGGGAAAAAATGAGAGAGCTGTGTAGTGAGAAGAATTTAGAGAAATTAGAAGGTATCTGGAAGAAGGGGGACCTGCAAAAGATTCCTAAAGCTGTTCTTCACCAACTATGTCAAAAATCAGGCTGGGAAGCTCCAAAATTCAATAAAGTGCTCGGAAGGGAACTAGGGTTCTCTTATGCTGTTAGCATATTACGCAAAGCTAGTGGGAGGGGCAAGAGCAGAAAAGCTGGGGGGCTTATCACCCTTCAACTTCCTGATCAGGATGACACATTTCAATCTGCTGAGCATCGCAATGATGTTCACTTTTATTTTGGGCACGGGGATCGGGTGCCTTCTTTTTGGTTCCTTGTGCAAGGTGCAAGTGGGAATGAGAGTGGAGATGTCAACACATGTGACATTGGTAAAAGCAAGTCTGATGCCCAGAACAGAGTTGCAGCATTTGCTCTTCATCAACTCTTTCCTGATCTTCCTATTCATCTAGCAATCATCAACCCTTACTCTTCTCTTGTTTTGCAGTGGAAACAAGGGGAAACATCAAAAAGAGTGGAAGACAGTGTGGAGGATCGAAGGGCTGGTTTTGTGGATCTATTATTGAAGGCAGATGGTTCTAGTTCATCTGCTGTTGATGCTACAACTAGTTCTCAAGAAACTTTAAAAATTAATGATGTCGAGGAAACCAAGGATTCTGGTGCTGATGCAAAAGTAGAAAGAAAAAAATATGCCAAGGATGCAGAAAGTTCTTATTTGAGACAGCAGCAAGAGTCTAAAAGGAAATTGAAGAAATACAAGGACATGCTGTGCTCTAGAGCTGCACTTCCTATTGCTGGATTGAAGGTTGATATTTTACAAATGCTGAAGGAGAATGATGTTCTTGTTGTTTGTGGAGAAACAGGTTCCGGAAAGACTACTCAGGTCCCACAATTTATACTGGATGACATGATTGAGTCAGGTCATGGTGGAAACTGTAACATCATATGCACACAACCAAGAAGAATAGCGGCTATATCTGTCGCTGAAAGAGTCGCTGATGAGCGCTGTGAACCTTCTCCTGGTGCAGTTGGTTCTTTGGTTGGATATCAAGTTCGTCTTGATAGTGCAAGGAATGAAAAAACAAAACTTCTCTTTTGTACAACAGGCATTCTTCTAAGGAAGCTTGTGGGGGATAGGAGTTTGAGTGGAATAACACATGTCATAGTTGATGAAGTGCATGAACGATCTCTTTTGGTGAGATTCAGACTCATGTCTAGGTGGGATCACCACTTTGTTAACATGTCTCTACAGTCTAAACACTCCAGTAACCTGTGCATGATGCTTGATGCTATGCTGACCTGGGTGATTTTCTACTCATTGTTTGAGAACCTGATTGAGAAGCAATCTTCTCAAGACACACCAAAACTTAAAGTTATTCTTATGTCTGCCACAGTAGATTCAAATTTATTTTCGAGGTACTTTGGACAATGCCCTGTACTTACTGCTCAAGGCCGTACACATCCTAAAAGATTGAATGAAGAAATCATTGATTATGACCTTCTTGAAGACTTGATATGTTATTTGATGAAACATGTGGGCGTGTCTGAAATTTACATGCTACTCGATAGGAATGAAAAAACAAAACTTCTCTTTTGTACAACAGGCATTCTTCTAAGGAAGCTTGTGGGGGATAGGAGTTTGAGTGGAATAACACATGTCATAGTTGATGAAGTGCATGAACGATCTCTTTTGGGTGATTTTCTACTCATTGTTTTGAAGAACCTGATTGAGAAGCAATCTTCTCAAGACACACCAAAACTTAAAGTTATTCTTATGTCTGCCACAGTAGATTCAAATTTATTTTCGAGGTACTTTGGACAATGCCCTGTACTTACTGCTCAAGGCCGTACACATCCTGTAACAAATTACTTTCTTGAGGATATATATGAATACATCAATTATAACCTGGCTTCAGATGCTCCAGCTGCTTTAAGATATGAAACATCTGCAATTGATAAGAATGGTCCTGTAGATAACCACAGAGGGAAGAAGAATCTAGTTTTATCTGCATGGGGTGATGATTCTCAGCTTTCAGAAGACTGTGTTAACCCCCATTATATTTCAACTAGCTACCAAACTTACAGTGAGCAAACACAAAAGAATTTGAAAAGATTGAATGAAGAAATCATTGATTATGACCTTCTTGAAGACTTGATATGTTATGTTGATGAAACATGTGGTGAGGGTGCCATACTCATCTTTTTGCCGGGCGTGTCTGAAATTTACATGCTACTCGATAGGTTGGTTGCTTCTTATCGATTTGGAGGACCATCTTCTGATTGGGTTCTTCCTTTGCATTCATCTATAGCATCAAAGGACCAAAAAAAGGTGTTTCTATGGCCGCCTGAAAACATACGCAAGGCTGGTGGGTTGAGTTTGCAATTGTTGCCTCCATTGTTTGTAGCAAATGAGACCACCCTGAGACCAGCAAATGACCTTTTTGATTTGTCAAAAGCAATTAAAAGCCTTTCATGGAAGGTTATTATAGCCACCAACATTGCAGAGACAAGTTTAACAATAGATGATGTCGTCTATGTGATTGATTGTGGAAAACACAAGGAAAATCGTTATAATCCTCAGAAGAAATTGACAAGCATGGTCGAAGATTGGATATCTCAAGCAAATGCAAGGCAGCGCCGAGGGAGAGCTGGACGAGTAAAACCTGGAATTTGCTTTTGCTTGTACACACGCCACAGATTTGAAAAACTCATGCGTCCTTATCAGGTTCCCGAGATGCTTCGGATGCCATTAGTGGAGCTTTCTCTGCAAATTAAATTACTTTCTCTGGGACACATAAAGCCATTTTTATCCAAGGCTTTAGAACCTCCAAGGGAGGAGGCTATGACTTCTGCAATTTCACTGTTATATGAGGTTGGAGCCTTAGAAGGGGATGAACAATTGACACCTCTTGGACATCATTTGGCAAAACTTCCCGTTGATGTACTGATTGGAAAGATGCTGCTTTATGGTGCAATATTTGGTTGCTTATCACCTATTCTGTCAATTTCTGCATTCCTGAGTTACAAGTCACCTTTTGTGTACCCAAAAGATGAGAAGCAAAATGTTGAAAGGGCAAAGCTTGCACTGTTAGCTGACAAGATAGATGGCTCAAATGATTCGAATTATAATGACAGGCTTTCTGACCACCTCTTAATGATGGTTGCATACAAAAAATGGGAGAAGATTTTGAGCGAGAGGGGATTTAAAGCTGCACAGCAATTTTGTGCTACTTACTTTTTGAGCAGTTCAGTTATGCACATGATAAGGGACATGAGGACACAGTTTGGAACACTGCTAGCAGACATTGGGCTTATCAGTATTCCAAAGAGTTATCAGGTTGGGAGAATGAAGAAAGAGAATCTTGATAGCTGGCTGTCTGAAAAATCACAACCATTCAACATGTATTCACATCATTCCTCACTTGTGAAGTCCTTACCATTTGGGACTCCTTCACACCATGATATGGTATTTGATTATTGGCATCAGAAAGCTTCAAAAGTGCCACTTGAGGCAATTTTATGTGCAGGTTTATACCCCAATGTTGCTGCAACTGAACAAGGAATAACTGCAGCAACTCTCAATGGCCTAAAACAGTCCAGCAGGCCTGGAAAAAAGGGTCATCCAATATGGTATGATGGAAGAAGAGAGGTTCACATACACCCTTCTTCGGTCAACTGTAACATGAAAGCATTTCCGCACCCATTTCTTGTGTTCCTTGAAAAGGTTGAGACCAACAAAGTATTTCTGCGAGACACCACTATTATATCTCCCTTCTCTATCTTGCTCTTTGGTGGCGCAATTAACATTCAACACCAGACCGGTCTTCTCACTATAGATGGATGGCTAAAGCTGACAGCTTCAGCCCAGTATGCTGTCTTATTTAAAGAACTCCGGTCAACACTTCATGCTCTATTGAAGGAGCTGATTCGAAAGCCAGAGAATGCAACTCTTGTGGATAATGAGGTCGTCAAATCCATGATTCAGCTGTTGTTAGATGAAGACAAACCCCAAACATGA
Protein:  
MAPKKNPQRSSSNNKASSSKSKSSSNSGPRLQISAENENRLRRLLLNSTTTPPLQTTVTDNTNSLSKAQKAKKLKNIYEKLSCEGFSNDHIELALSSLKDNATFETALDWLCLNLAGNELPLKFSGGTSLNSDRGSVSVVSTAREDWVPYVDSSRRIEGEEEEQRVLVRTKARWDEEDGDGNVLDFRQPSQADWIRQYVEQQEEEESKTWEDDSVDGSFTNKDRQPRTYDVIAKEYHAVRLEATKAKEKGDKKSQEQAGHVIRKLKQEISALGLSLDLLEQDFGHQHVYEDMFSTSTPCEHFEAITSFDVEGDSTIESIVDENDLESSSSIGFPLNPVPPSVPLEGEIVSDESEDVEIGDFFIDDASPNDALSPGILEIQKREKMRELCSEKNLEKLEGIWKKGDLQKIPKAVLHQLCQKSGWEAPKFNKVLGRELGFSYAVSILRKASGRGKSRKAGGLITLQLPDQDDTFQSAEHRNDVHFYFGHGDRVPSFWFLVQGASGNESGDVNTCDIGKSKSDAQNRVAAFALHQLFPDLPIHLAIINPYSSLVLQWKQGETSKRVEDSVEDRRAGFVDLLLKADGSSSSAVDATTSSQETLKINDVEETKDSGADAKVERKKYAKDAESSYLRQQQESKRKLKKYKDMLCSRAALPIAGLKVDILQMLKENDVLVVCGETGSGKTTQVPQFILDDMIESGHGGNCNIICTQPRRIAAISVAERVADERCEPSPGAVGSLVGYQVRLDSARNEKTKLLFCTTGILLRKLVGDRSLSGITHVIVDEVHERSLLVRFRLMSRWDHHFVNMSLQSKHSSNLCMMLDAMLTWVIFYSLFENLIEKQSSQDTPKLKVILMSATVDSNLFSRYFGQCPVLTAQGRTHPKRLNEEIIDYDLLEDLICYLMKHVGVSEIYMLLDRNEKTKLLFCTTGILLRKLVGDRSLSGITHVIVDEVHERSLLGDFLLIVLKNLIEKQSSQDTPKLKVILMSATVDSNLFSRYFGQCPVLTAQGRTHPVTNYFLEDIYEYINYNLASDAPAALRYETSAIDKNGPVDNHRGKKNLVLSAWGDDSQLSEDCVNPHYISTSYQTYSEQTQKNLKRLNEEIIDYDLLEDLICYVDETCGEGAILIFLPGVSEIYMLLDRLVASYRFGGPSSDWVLPLHSSIASKDQKKVFLWPPENIRKAGGLSLQLLPPLFVANETTLRPANDLFDLSKAIKSLSWKVIIATNIAETSLTIDDVVYVIDCGKHKENRYNPQKKLTSMVEDWISQANARQRRGRAGRVKPGICFCLYTRHRFEKLMRPYQVPEMLRMPLVELSLQIKLLSLGHIKPFLSKALEPPREEAMTSAISLLYEVGALEGDEQLTPLGHHLAKLPVDVLIGKMLLYGAIFGCLSPILSISAFLSYKSPFVYPKDEKQNVERAKLALLADKIDGSNDSNYNDRLSDHLLMMVAYKKWEKILSERGFKAAQQFCATYFLSSSVMHMIRDMRTQFGTLLADIGLISIPKSYQVGRMKKENLDSWLSEKSQPFNMYSHHSSLVKSLPFGTPSHHDMVFDYWHQKASKVPLEAILCAGLYPNVAATEQGITAATLNGLKQSSRPGKKGHPIWYDGRREVHIHPSSVNCNMKAFPHPFLVFLEKVETNKVFLRDTTIISPFSILLFGGAINIQHQTGLLTIDGWLKLTASAQYAVLFKELRSTLHALLKELIRKPENATLVDNEVVKSMIQLLLDEDKPQT